Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 FGFR3P1-201ENST00000449999 601 ntBASIC19.16■□□□□ 0.66
RC3H1Q5TC82 AC073150.1-201ENST00000450406 1084 ntBASIC19.16■□□□□ 0.66
RC3H1Q5TC82 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 AC090857.1-201ENST00000527400 390 ntBASIC19.16■□□□□ 0.66
RC3H1Q5TC82 NPM1P43-201ENST00000558669 786 ntBASIC19.16■□□□□ 0.66
RC3H1Q5TC82 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 WDR7-208ENST00000589935 544 ntTSL 4 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 AC005332.8-201ENST00000622750 2735 ntBASIC19.16■□□□□ 0.66
RC3H1Q5TC82 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RC3H1Q5TC82 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 KLF2P1-201ENST00000447438 1042 ntBASIC19.15■□□□□ 0.66
RC3H1Q5TC82 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 IGLV3-15-201ENST00000518356 244 ntBASIC19.15■□□□□ 0.66
RC3H1Q5TC82 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 NEU3-205ENST00000531619 582 ntTSL 5 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 FAM90A7P-201ENST00000382628 1395 ntBASIC19.15■□□□□ 0.66
RC3H1Q5TC82 FAM90A23P-201ENST00000400136 1395 ntBASIC19.15■□□□□ 0.66
RC3H1Q5TC82 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RC3H1Q5TC82 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RC3H1Q5TC82 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
RC3H1Q5TC82 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
RC3H1Q5TC82 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 AMT-239ENST00000636865 1914 ntTSL 5 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 AL157414.3-201ENST00000624276 1954 ntBASIC19.14■□□□□ 0.65
RC3H1Q5TC82 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 RN7SKP230-201ENST00000365642 335 ntBASIC19.14■□□□□ 0.65
RC3H1Q5TC82 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 RN7SL181P-201ENST00000462921 277 ntBASIC19.14■□□□□ 0.65
RC3H1Q5TC82 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 MST1L-201ENST00000442552 2185 ntBASIC19.14■□□□□ 0.65
RC3H1Q5TC82 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.14■□□□□ 0.65
RC3H1Q5TC82 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms