Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
USH1GQ495M9 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.75■□□□□ 0.43
USH1GQ495M9 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.75■□□□□ 0.43
USH1GQ495M9 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
USH1GQ495M9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
USH1GQ495M9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.74■□□□□ 0.43
USH1GQ495M9 AC093525.8-201ENST00000624099 1342 ntBASIC17.74■□□□□ 0.43
USH1GQ495M9 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.74■□□□□ 0.43
USH1GQ495M9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USH1GQ495M9 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC17.74■□□□□ 0.43
USH1GQ495M9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
USH1GQ495M9 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USH1GQ495M9 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.74■□□□□ 0.43
USH1GQ495M9 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.74■□□□□ 0.43
USH1GQ495M9 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.74■□□□□ 0.43
USH1GQ495M9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC17.74■□□□□ 0.43
USH1GQ495M9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.74■□□□□ 0.43
USH1GQ495M9 GNRHR2-203ENST00000581100 1187 ntBASIC17.74■□□□□ 0.43
USH1GQ495M9 AP005019.2-201ENST00000615104 511 ntBASIC17.74■□□□□ 0.43
USH1GQ495M9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
USH1GQ495M9 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.74■□□□□ 0.43
USH1GQ495M9 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
USH1GQ495M9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 AC090616.6-203ENST00000579186 1945 ntBASIC17.74■□□□□ 0.43
USH1GQ495M9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
USH1GQ495M9 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
USH1GQ495M9 AL513477.1-201ENST00000602865 2407 ntBASIC17.73■□□□□ 0.43
USH1GQ495M9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.73■□□□□ 0.43
USH1GQ495M9 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.73■□□□□ 0.43
USH1GQ495M9 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
USH1GQ495M9 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.73■□□□□ 0.43
USH1GQ495M9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.73■□□□□ 0.43
USH1GQ495M9 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.73■□□□□ 0.43
USH1GQ495M9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.73■□□□□ 0.43
USH1GQ495M9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
USH1GQ495M9 KRT18P25-201ENST00000508931 1278 ntBASIC17.73■□□□□ 0.43
USH1GQ495M9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.73■□□□□ 0.43
USH1GQ495M9 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.73■□□□□ 0.43
USH1GQ495M9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.73■□□□□ 0.43
USH1GQ495M9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
USH1GQ495M9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.73■□□□□ 0.43
USH1GQ495M9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.73■□□□□ 0.43
USH1GQ495M9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USH1GQ495M9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
USH1GQ495M9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
USH1GQ495M9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
USH1GQ495M9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USH1GQ495M9 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USH1GQ495M9 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.72■□□□□ 0.43
USH1GQ495M9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.72■□□□□ 0.43
USH1GQ495M9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USH1GQ495M9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USH1GQ495M9 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USH1GQ495M9 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.72■□□□□ 0.43
USH1GQ495M9 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USH1GQ495M9 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
USH1GQ495M9 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USH1GQ495M9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.72■□□□□ 0.43
USH1GQ495M9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
USH1GQ495M9 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.72■□□□□ 0.43
USH1GQ495M9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USH1GQ495M9 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USH1GQ495M9 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
USH1GQ495M9 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.72■□□□□ 0.43
USH1GQ495M9 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC17.72■□□□□ 0.43
USH1GQ495M9 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
USH1GQ495M9 AC016694.1-201ENST00000434179 700 ntBASIC17.72■□□□□ 0.43
USH1GQ495M9 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms