Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 FAM220BP-201ENST00000377689 816 ntBASIC13.81□□□□□ -0.2
ODF4Q2M2E3 HLA-H-201ENST00000383620 1096 ntBASIC13.81□□□□□ -0.2
ODF4Q2M2E3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 AC079140.1-201ENST00000508039 487 ntBASIC13.81□□□□□ -0.2
ODF4Q2M2E3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 AC026120.1-201ENST00000611536 926 ntBASIC13.81□□□□□ -0.2
ODF4Q2M2E3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.81□□□□□ -0.2
ODF4Q2M2E3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 BX640515.1-201ENST00000617215 977 ntBASIC13.8□□□□□ -0.2
ODF4Q2M2E3 FAM197Y3-203ENST00000618346 717 ntBASIC13.8□□□□□ -0.2
ODF4Q2M2E3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ODF4Q2M2E3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.79□□□□□ -0.2
ODF4Q2M2E3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms