Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.06■□□□□ 0.8
CCDC27Q2M243 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC27Q2M243 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC27Q2M243 AP005019.2-201ENST00000615104 511 ntBASIC20.06■□□□□ 0.8
CCDC27Q2M243 CU634019.7-201ENST00000624153 1185 ntBASIC20.06■□□□□ 0.8
CCDC27Q2M243 FP236241.2-201ENST00000624906 1185 ntBASIC20.06■□□□□ 0.8
CCDC27Q2M243 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC20.06■□□□□ 0.8
CCDC27Q2M243 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC27Q2M243 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC27Q2M243 F11R-206ENST00000621309 4770 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC27Q2M243 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC27Q2M243 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CCDC27Q2M243 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC27Q2M243 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
CCDC27Q2M243 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC27Q2M243 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC20.06■□□□□ 0.8
CCDC27Q2M243 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC27Q2M243 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC27Q2M243 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC27Q2M243 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
CCDC27Q2M243 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CCDC27Q2M243 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC20.06■□□□□ 0.8
CCDC27Q2M243 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 ZEB1-AS1-208ENST00000607166 2503 ntBASIC20.05■□□□□ 0.8
CCDC27Q2M243 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 AP006294.1-201ENST00000415407 339 ntBASIC20.05■□□□□ 0.8
CCDC27Q2M243 ACTG1P3-201ENST00000431775 1114 ntBASIC20.05■□□□□ 0.8
CCDC27Q2M243 AC114812.1-204ENST00000449669 728 ntBASIC20.05■□□□□ 0.8
CCDC27Q2M243 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 TAF8-206ENST00000472818 719 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 AC022137.2-201ENST00000503482 481 ntBASIC20.05■□□□□ 0.8
CCDC27Q2M243 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 DUX4L47-201ENST00000566374 394 ntBASIC20.05■□□□□ 0.8
CCDC27Q2M243 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 SRP9-204ENST00000619790 377 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 AC144831.1-201ENST00000573312 2656 ntBASIC20.05■□□□□ 0.8
CCDC27Q2M243 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CCDC27Q2M243 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CCDC27Q2M243 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 PGGT1BP2-201ENST00000398621 1028 ntBASIC20.04■□□□□ 0.8
CCDC27Q2M243 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 AL035633.1-201ENST00000406139 838 ntBASIC20.04■□□□□ 0.8
CCDC27Q2M243 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 AP001582.1-201ENST00000525856 295 ntBASIC20.04■□□□□ 0.8
CCDC27Q2M243 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC20.04■□□□□ 0.8
CCDC27Q2M243 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CCDC27Q2M243 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms