Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDH1Q08174 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDH1Q08174 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDH1Q08174 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PCDH1Q08174 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDH1Q08174 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDH1Q08174 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDH1Q08174 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
PCDH1Q08174 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.98□□□□□ -0.01
PCDH1Q08174 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
PCDH1Q08174 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDH1Q08174 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDH1Q08174 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
PCDH1Q08174 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDH1Q08174 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH1Q08174 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
PCDH1Q08174 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDH1Q08174 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
PCDH1Q08174 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
PCDH1Q08174 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
PCDH1Q08174 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.97□□□□□ -0.01
PCDH1Q08174 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH1Q08174 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDH1Q08174 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.97□□□□□ -0.01
PCDH1Q08174 MEIS3P1-201ENST00000495167 958 ntBASIC14.97□□□□□ -0.01
PCDH1Q08174 GAPDHP40-201ENST00000505218 1006 ntBASIC14.97□□□□□ -0.01
PCDH1Q08174 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDH1Q08174 TIMM17BP1-201ENST00000545713 516 ntBASIC14.97□□□□□ -0.01
PCDH1Q08174 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.97□□□□□ -0.01
PCDH1Q08174 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDH1Q08174 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
PCDH1Q08174 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
PCDH1Q08174 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
PCDH1Q08174 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 AGAP7P-201ENST00000582299 2062 ntBASIC14.97□□□□□ -0.01
PCDH1Q08174 AGAP14-201ENST00000624701 2060 ntBASIC14.97□□□□□ -0.01
PCDH1Q08174 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.97□□□□□ -0.01
PCDH1Q08174 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH1Q08174 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
PCDH1Q08174 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.97□□□□□ -0.01
PCDH1Q08174 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PCDH1Q08174 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
PCDH1Q08174 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PCDH1Q08174 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
PCDH1Q08174 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.96□□□□□ -0.01
PCDH1Q08174 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
PCDH1Q08174 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
PCDH1Q08174 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms