Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TPM4P67936 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
TPM4P67936 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.46■□□□□ 0.39
TPM4P67936 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
TPM4P67936 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TPM4P67936 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
TPM4P67936 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TPM4P67936 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
TPM4P67936 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.45■□□□□ 0.38
TPM4P67936 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TPM4P67936 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.45■□□□□ 0.38
TPM4P67936 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 CICP14-201ENST00000629111 2732 ntBASIC17.45■□□□□ 0.38
TPM4P67936 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
TPM4P67936 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TPM4P67936 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM4P67936 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TPM4P67936 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TPM4P67936 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.45■□□□□ 0.38
TPM4P67936 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.45■□□□□ 0.38
TPM4P67936 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.45■□□□□ 0.38
TPM4P67936 AC074386.1-202ENST00000463561 864 ntBASIC17.45■□□□□ 0.38
TPM4P67936 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.45■□□□□ 0.38
TPM4P67936 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.45■□□□□ 0.38
TPM4P67936 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.45■□□□□ 0.38
TPM4P67936 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.45■□□□□ 0.38
TPM4P67936 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TPM4P67936 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM4P67936 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.45■□□□□ 0.38
TPM4P67936 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM4P67936 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.45■□□□□ 0.38
TPM4P67936 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TPM4P67936 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TPM4P67936 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TPM4P67936 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TPM4P67936 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM4P67936 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 FAM220BP-201ENST00000377689 816 ntBASIC17.44■□□□□ 0.38
TPM4P67936 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TPM4P67936 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.44■□□□□ 0.38
TPM4P67936 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM4P67936 EEF1DP4-201ENST00000446006 880 ntBASIC17.44■□□□□ 0.38
TPM4P67936 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.44■□□□□ 0.38
TPM4P67936 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.44■□□□□ 0.38
TPM4P67936 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.44■□□□□ 0.38
TPM4P67936 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.44■□□□□ 0.38
TPM4P67936 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.44■□□□□ 0.38
TPM4P67936 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.44■□□□□ 0.38
TPM4P67936 Z83851.2-201ENST00000609564 659 ntBASIC17.44■□□□□ 0.38
TPM4P67936 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 INTS4P1-203ENST00000641008 3683 ntBASIC17.44■□□□□ 0.38
TPM4P67936 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TPM4P67936 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TPM4P67936 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TPM4P67936 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TPM4P67936 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
TPM4P67936 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TPM4P67936 FOXO1B-201ENST00000504678 1527 ntBASIC17.43■□□□□ 0.38
TPM4P67936 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms