Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN2DP55273 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDKN2DP55273 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDKN2DP55273 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDKN2DP55273 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN2DP55273 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN2DP55273 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN2DP55273 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN2DP55273 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKN2DP55273 SPDYE18-201ENST00000510091 1050 ntBASIC15.31■□□□□ 0.04
CDKN2DP55273 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKN2DP55273 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.31■□□□□ 0.04
CDKN2DP55273 AL390754.1-201ENST00000619088 582 ntBASIC15.31■□□□□ 0.04
CDKN2DP55273 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
CDKN2DP55273 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDKN2DP55273 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKN2DP55273 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 REXO1L4P-201ENST00000605109 1937 ntBASIC15.31■□□□□ 0.04
CDKN2DP55273 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKN2DP55273 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDKN2DP55273 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDKN2DP55273 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKN2DP55273 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKN2DP55273 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKN2DP55273 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CDKN2DP55273 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKN2DP55273 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKN2DP55273 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDKN2DP55273 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKN2DP55273 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKN2DP55273 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKN2DP55273 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKN2DP55273 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
CDKN2DP55273 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.3■□□□□ 0.04
CDKN2DP55273 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDKN2DP55273 AL589987.1-201ENST00000453380 819 ntBASIC15.3■□□□□ 0.04
CDKN2DP55273 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKN2DP55273 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.3■□□□□ 0.04
CDKN2DP55273 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CDKN2DP55273 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKN2DP55273 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.3■□□□□ 0.04
CDKN2DP55273 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 AC092337.1-201ENST00000568699 1129 ntBASIC15.3■□□□□ 0.04
CDKN2DP55273 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
CDKN2DP55273 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.3■□□□□ 0.04
CDKN2DP55273 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKN2DP55273 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CDKN2DP55273 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CDKN2DP55273 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CDKN2DP55273 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.29■□□□□ 0.04
CDKN2DP55273 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDKN2DP55273 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms