Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.06■□□□□ 0.32
PMS1P54277 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
PMS1P54277 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
PMS1P54277 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PMS1P54277 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PMS1P54277 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.05■□□□□ 0.32
PMS1P54277 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PMS1P54277 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PMS1P54277 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 MIR943-201ENST00000401286 94 ntBASIC17.05■□□□□ 0.32
PMS1P54277 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17.05■□□□□ 0.32
PMS1P54277 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.05■□□□□ 0.32
PMS1P54277 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
PMS1P54277 AC009477.1-201ENST00000452936 217 ntBASIC17.05■□□□□ 0.32
PMS1P54277 HNRNPA3P5-201ENST00000455201 833 ntBASIC17.05■□□□□ 0.32
PMS1P54277 KRT18P43-201ENST00000469825 1281 ntBASIC17.05■□□□□ 0.32
PMS1P54277 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 ZNF890P-202ENST00000530367 1156 ntBASIC17.05■□□□□ 0.32
PMS1P54277 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.05■□□□□ 0.32
PMS1P54277 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.05■□□□□ 0.32
PMS1P54277 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.05■□□□□ 0.32
PMS1P54277 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 AL009178.2-201ENST00000597278 2719 ntBASIC17.05■□□□□ 0.32
PMS1P54277 FAM45BP-202ENST00000592932 1624 ntBASIC17.05■□□□□ 0.32
PMS1P54277 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.05■□□□□ 0.32
PMS1P54277 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PMS1P54277 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.04■□□□□ 0.32
PMS1P54277 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
PMS1P54277 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 KRT18P28-201ENST00000453838 1332 ntBASIC17.04■□□□□ 0.32
PMS1P54277 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.04■□□□□ 0.32
PMS1P54277 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 AC104457.1-201ENST00000401024 814 ntBASIC17.04■□□□□ 0.32
PMS1P54277 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.04■□□□□ 0.32
PMS1P54277 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.04■□□□□ 0.32
PMS1P54277 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.04■□□□□ 0.32
PMS1P54277 METTL21AP1-201ENST00000438852 635 ntBASIC17.04■□□□□ 0.32
PMS1P54277 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 FAM86GP-201ENST00000448322 971 ntBASIC17.04■□□□□ 0.32
PMS1P54277 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.04■□□□□ 0.32
PMS1P54277 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.04■□□□□ 0.32
PMS1P54277 AC004790.1-201ENST00000612686 536 ntBASIC17.04■□□□□ 0.32
PMS1P54277 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.04■□□□□ 0.32
PMS1P54277 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.04■□□□□ 0.32
PMS1P54277 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC17.04■□□□□ 0.32
PMS1P54277 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC17.04■□□□□ 0.32
PMS1P54277 AC138969.3-201ENST00000546612 1459 ntBASIC17.04■□□□□ 0.32
PMS1P54277 AC138932.2-201ENST00000548268 1459 ntBASIC17.04■□□□□ 0.32
PMS1P54277 AC126755.4-201ENST00000549796 1459 ntBASIC17.04■□□□□ 0.32
PMS1P54277 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.04■□□□□ 0.32
PMS1P54277 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
PMS1P54277 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
PMS1P54277 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
PMS1P54277 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.04■□□□□ 0.32
PMS1P54277 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms