Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CLK1P49759 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLK1P49759 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLK1P49759 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.69□□□□□ -0.06
CLK1P49759 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLK1P49759 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLK1P49759 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLK1P49759 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.69□□□□□ -0.06
CLK1P49759 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.69□□□□□ -0.06
CLK1P49759 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CLK1P49759 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLK1P49759 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CLK1P49759 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.69□□□□□ -0.06
CLK1P49759 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.69□□□□□ -0.06
CLK1P49759 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLK1P49759 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLK1P49759 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 UXT-AS1-201ENST00000590504 1525 ntBASIC14.68□□□□□ -0.06
CLK1P49759 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.68□□□□□ -0.06
CLK1P49759 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 HLA-H-201ENST00000383620 1096 ntBASIC14.68□□□□□ -0.06
CLK1P49759 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.68□□□□□ -0.06
CLK1P49759 AC005237.2-201ENST00000434368 219 ntBASIC14.68□□□□□ -0.06
CLK1P49759 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.68□□□□□ -0.06
CLK1P49759 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.68□□□□□ -0.06
CLK1P49759 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
CLK1P49759 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.68□□□□□ -0.06
CLK1P49759 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.68□□□□□ -0.06
CLK1P49759 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.68□□□□□ -0.06
CLK1P49759 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CLK1P49759 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLK1P49759 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.68□□□□□ -0.06
CLK1P49759 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLK1P49759 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLK1P49759 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLK1P49759 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLK1P49759 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLK1P49759 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CLK1P49759 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
CLK1P49759 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLK1P49759 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLK1P49759 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLK1P49759 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLK1P49759 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLK1P49759 AC004461.1-201ENST00000412461 403 ntBASIC14.67□□□□□ -0.06
CLK1P49759 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.67□□□□□ -0.06
CLK1P49759 AC069335.1-201ENST00000489972 472 ntBASIC14.67□□□□□ -0.06
CLK1P49759 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.67□□□□□ -0.06
CLK1P49759 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.67□□□□□ -0.06
CLK1P49759 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.67□□□□□ -0.06
CLK1P49759 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.67□□□□□ -0.06
CLK1P49759 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.67□□□□□ -0.06
CLK1P49759 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.67□□□□□ -0.06
CLK1P49759 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.67□□□□□ -0.06
CLK1P49759 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.67□□□□□ -0.06
CLK1P49759 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms