Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.85□□□□□ -0.19
CSNK1A1P48729 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CSNK1A1P48729 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 AL109954.1-202ENST00000564051 2148 ntBASIC13.84□□□□□ -0.19
CSNK1A1P48729 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 OR2I1P-210ENST00000642037 4691 ntBASIC13.84□□□□□ -0.19
CSNK1A1P48729 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.84□□□□□ -0.19
CSNK1A1P48729 FAM8A3P-201ENST00000427218 844 ntBASIC13.84□□□□□ -0.19
CSNK1A1P48729 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 AC092337.1-201ENST00000568699 1129 ntBASIC13.84□□□□□ -0.19
CSNK1A1P48729 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 AC008738.7-201ENST00000609744 511 ntBASIC13.84□□□□□ -0.19
CSNK1A1P48729 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.84□□□□□ -0.19
CSNK1A1P48729 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 AL121723.1-201ENST00000445194 1519 ntBASIC13.84□□□□□ -0.19
CSNK1A1P48729 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CSNK1A1P48729 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.84□□□□□ -0.19
CSNK1A1P48729 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CSNK1A1P48729 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.83□□□□□ -0.19
CSNK1A1P48729 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CSNK1A1P48729 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CSNK1A1P48729 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
CSNK1A1P48729 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 INGX-202ENST00000489074 768 ntBASIC13.83□□□□□ -0.2
CSNK1A1P48729 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 AC027796.2-201ENST00000575326 344 ntBASIC13.83□□□□□ -0.2
CSNK1A1P48729 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.83□□□□□ -0.2
CSNK1A1P48729 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CSNK1A1P48729 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms