Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MKRN5P-201ENST00000445263 1467 ntBASIC10.26□□□□□ -0.77
PCP4P48539 PEX5L-208ENST00000467460 9082 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC10.26□□□□□ -0.77
PCP4P48539 FAM8A3P-201ENST00000427218 844 ntBASIC10.26□□□□□ -0.77
PCP4P48539 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
PCP4P48539 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC10.26□□□□□ -0.77
PCP4P48539 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC10.26□□□□□ -0.77
PCP4P48539 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
PCP4P48539 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 KBTBD4-209ENST00000533290 3079 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 PCDHA4-204ENST00000618834 10557 ntBASIC10.26□□□□□ -0.77
PCP4P48539 AC135279.3-201ENST00000610945 1311 ntBASIC10.26□□□□□ -0.77
PCP4P48539 THUMPD3-206ENST00000452837 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 VPS45-211ENST00000535106 2695 ntTSL 5 BASIC10.26□□□□□ -0.77
PCP4P48539 BOLA2-SMG1P6-201ENST00000565417 3103 ntTSL 2 BASIC10.26□□□□□ -0.77
PCP4P48539 MUC4-204ENST00000349607 3829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
PCP4P48539 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
PCP4P48539 SYNPO-204ENST00000519664 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 CLNS1A-204ENST00000525428 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 UBOX5-201ENST00000217173 4631 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
PCP4P48539 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 KRT38-201ENST00000246646 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 SV2A-202ENST00000369146 4416 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 CAMTA2-201ENST00000348066 4491 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 POC1B-GALNT4-202ENST00000548729 5436 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 PAXIP1-AS2-203ENST00000449486 2121 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 CARMN-205ENST00000518014 5131 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 ELF3-203ENST00000367284 3179 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 ACSBG2-205ENST00000588304 2759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 HLA-G-202ENST00000376815 851 ntBASIC10.25□□□□□ -0.77
PCP4P48539 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC10.25□□□□□ -0.77
PCP4P48539 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 AC008764.7-201ENST00000593779 1081 ntBASIC10.25□□□□□ -0.77
PCP4P48539 GXYLT1P5-201ENST00000614548 1189 ntBASIC10.25□□□□□ -0.77
PCP4P48539 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 TBX19-201ENST00000367821 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 TRAK1-202ENST00000341421 4620 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 GATAD2B-201ENST00000368655 7478 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 AC011899.1-201ENST00000436489 3600 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 AHSG-201ENST00000273784 1553 ntAPPRIS ALT2 TSL 3 BASIC10.25□□□□□ -0.77
PCP4P48539 SLC9A8-202ENST00000417961 6309 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 ZC3H12C-203ENST00000528673 2931 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 FCHO1-208ENST00000595033 2907 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 INO80-211ENST00000616814 4272 ntTSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 VRTN-201ENST00000256362 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 LPXN-203ENST00000528954 1879 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 PIK3C2B-204ENST00000424712 7522 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 TIFAB-201ENST00000537858 5923 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 AC068831.1-202ENST00000557804 2159 ntTSL 3 BASIC10.25□□□□□ -0.77
PCP4P48539 NRIP2-201ENST00000337508 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 BPNT1-201ENST00000322067 2465 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
PCP4P48539 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.25□□□□□ -0.77
PCP4P48539 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
PCP4P48539 RAB5A-203ENST00000422242 1443 ntTSL 2 BASIC10.24□□□□□ -0.77
PCP4P48539 KRT8P17-201ENST00000453110 1448 ntBASIC10.24□□□□□ -0.77
PCP4P48539 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
PCP4P48539 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms