Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLC1A3P43003 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 AC005089.1-201ENST00000619486 2241 ntBASIC14.31□□□□□ -0.12
SLC1A3P43003 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.31□□□□□ -0.12
SLC1A3P43003 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.31□□□□□ -0.12
SLC1A3P43003 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.31□□□□□ -0.12
SLC1A3P43003 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.31□□□□□ -0.12
SLC1A3P43003 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.31□□□□□ -0.12
SLC1A3P43003 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
SLC1A3P43003 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 AC087499.5-201ENST00000452760 1342 ntBASIC14.31□□□□□ -0.12
SLC1A3P43003 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 KRT8P44-201ENST00000441609 1350 ntBASIC14.31□□□□□ -0.12
SLC1A3P43003 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SLC1A3P43003 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.31□□□□□ -0.12
SLC1A3P43003 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLC1A3P43003 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SLC1A3P43003 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLC1A3P43003 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
SLC1A3P43003 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC1A3P43003 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 AC097493.3-201ENST00000509725 367 ntBASIC14.3□□□□□ -0.12
SLC1A3P43003 SLED1-202ENST00000512051 380 ntBASIC14.3□□□□□ -0.12
SLC1A3P43003 SDHAP3-202ENST00000515467 728 ntBASIC14.3□□□□□ -0.12
SLC1A3P43003 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 AL512361.1-201ENST00000554200 418 ntBASIC14.3□□□□□ -0.12
SLC1A3P43003 AC010336.2-201ENST00000564226 506 ntBASIC14.3□□□□□ -0.12
SLC1A3P43003 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC1A3P43003 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.3□□□□□ -0.12
SLC1A3P43003 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.3□□□□□ -0.12
SLC1A3P43003 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLC1A3P43003 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SLC1A3P43003 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SLC1A3P43003 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.3□□□□□ -0.12
SLC1A3P43003 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms