Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.82□□□□□ -0.2
CD40LGP29965 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CD40LGP29965 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CD40LGP29965 PAWRP1-201ENST00000451083 565 ntBASIC13.82□□□□□ -0.2
CD40LGP29965 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC13.82□□□□□ -0.2
CD40LGP29965 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.82□□□□□ -0.2
CD40LGP29965 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 AL365330.1-201ENST00000607459 531 ntBASIC13.82□□□□□ -0.2
CD40LGP29965 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.82□□□□□ -0.2
CD40LGP29965 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CD40LGP29965 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CD40LGP29965 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
CD40LGP29965 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CD40LGP29965 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CD40LGP29965 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 NCF1C-201ENST00000438382 1427 ntBASIC13.81□□□□□ -0.2
CD40LGP29965 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.81□□□□□ -0.2
CD40LGP29965 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC13.81□□□□□ -0.2
CD40LGP29965 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.81□□□□□ -0.2
CD40LGP29965 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.81□□□□□ -0.2
CD40LGP29965 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.81□□□□□ -0.2
CD40LGP29965 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CD40LGP29965 AL845331.1-201ENST00000424978 1190 ntBASIC13.81□□□□□ -0.2
CD40LGP29965 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 FOSL1P1-201ENST00000511041 816 ntBASIC13.81□□□□□ -0.2
CD40LGP29965 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC13.81□□□□□ -0.2
CD40LGP29965 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CD40LGP29965 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.81□□□□□ -0.2
CD40LGP29965 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.81□□□□□ -0.2
CD40LGP29965 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 SIGLEC16-201ENST00000599858 1437 ntBASIC13.81□□□□□ -0.2
CD40LGP29965 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CD40LGP29965 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CD40LGP29965 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.8□□□□□ -0.2
CD40LGP29965 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
CD40LGP29965 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 AC134407.2-201ENST00000625089 1978 ntBASIC13.8□□□□□ -0.2
CD40LGP29965 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CD40LGP29965 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 167.6 ms