Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.17□□□□□ -0.14
CD53P19397 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.17□□□□□ -0.14
CD53P19397 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.17□□□□□ -0.14
CD53P19397 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CD53P19397 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.17□□□□□ -0.14
CD53P19397 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.17□□□□□ -0.14
CD53P19397 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CD53P19397 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CD53P19397 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.16□□□□□ -0.14
CD53P19397 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD53P19397 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CD53P19397 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CD53P19397 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.16□□□□□ -0.14
CD53P19397 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.16□□□□□ -0.14
CD53P19397 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.16□□□□□ -0.14
CD53P19397 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.16□□□□□ -0.14
CD53P19397 ATP5G2P4-201ENST00000442175 420 ntBASIC14.16□□□□□ -0.14
CD53P19397 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.16□□□□□ -0.14
CD53P19397 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.16□□□□□ -0.14
CD53P19397 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.16□□□□□ -0.14
CD53P19397 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.16□□□□□ -0.14
CD53P19397 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.16□□□□□ -0.14
CD53P19397 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.16□□□□□ -0.14
CD53P19397 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.16□□□□□ -0.14
CD53P19397 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.16□□□□□ -0.14
CD53P19397 AC073389.1-201ENST00000595595 795 ntBASIC14.16□□□□□ -0.14
CD53P19397 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.16□□□□□ -0.14
CD53P19397 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CD53P19397 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.16□□□□□ -0.14
CD53P19397 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CD53P19397 AC106881.1-201ENST00000605849 3329 ntBASIC14.16□□□□□ -0.14
CD53P19397 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CD53P19397 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.16□□□□□ -0.14
CD53P19397 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CD53P19397 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
CD53P19397 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.15□□□□□ -0.14
CD53P19397 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CD53P19397 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.15□□□□□ -0.14
CD53P19397 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.15□□□□□ -0.14
CD53P19397 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.15□□□□□ -0.14
CD53P19397 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CD53P19397 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CD53P19397 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CD53P19397 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms