Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 RPS29-206ENST00000557111 488 ntTSL 2 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 RIN3-211ENST00000557762 517 ntTSL 3 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 AC105339.3-201ENST00000560043 636 ntBASIC11.65□□□□□ -0.54
SMIM17P0DL12 MIR4751-201ENST00000578027 74 ntBASIC11.65□□□□□ -0.54
SMIM17P0DL12 PRR29-207ENST00000580752 458 ntTSL 3 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 RELA-227ENST00000615805 2236 ntTSL 5 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMIM17P0DL12 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMIM17P0DL12 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMIM17P0DL12 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMIM17P0DL12 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMIM17P0DL12 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
SMIM17P0DL12 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC11.65□□□□□ -0.54
SMIM17P0DL12 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMIM17P0DL12 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
SMIM17P0DL12 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMIM17P0DL12 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC11.65□□□□□ -0.55
SMIM17P0DL12 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
SMIM17P0DL12 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.65□□□□□ -0.55
SMIM17P0DL12 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMIM17P0DL12 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMIM17P0DL12 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
SMIM17P0DL12 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.65□□□□□ -0.55
SMIM17P0DL12 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 PMS2P7-201ENST00000506558 1336 ntBASIC11.64□□□□□ -0.55
SMIM17P0DL12 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 AC073621.1-201ENST00000392730 636 ntBASIC11.64□□□□□ -0.55
SMIM17P0DL12 HMGA1P7-201ENST00000406908 502 ntBASIC11.64□□□□□ -0.55
SMIM17P0DL12 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 FAM210CP-201ENST00000445714 574 ntBASIC11.64□□□□□ -0.55
SMIM17P0DL12 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 AC008735.5-201ENST00000623544 497 ntBASIC11.64□□□□□ -0.55
SMIM17P0DL12 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SMIM17P0DL12 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SMIM17P0DL12 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM17P0DL12 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM17P0DL12 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM17P0DL12 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
SMIM17P0DL12 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
SMIM17P0DL12 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SMIM17P0DL12 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
SMIM17P0DL12 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.63□□□□□ -0.55
SMIM17P0DL12 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC11.63□□□□□ -0.55
SMIM17P0DL12 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
SMIM17P0DL12 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms