Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.65■□□□□ 0.26
HLA-DRAP01903 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HLA-DRAP01903 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HLA-DRAP01903 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.64■□□□□ 0.26
HLA-DRAP01903 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DRAP01903 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DRAP01903 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 CRB3P1-201ENST00000449338 276 ntBASIC16.64■□□□□ 0.25
HLA-DRAP01903 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 ELK1P1-201ENST00000485699 580 ntBASIC16.64■□□□□ 0.25
HLA-DRAP01903 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DRAP01903 AC140912.1-201ENST00000577171 1054 ntBASIC16.64■□□□□ 0.25
HLA-DRAP01903 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DRAP01903 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DRAP01903 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DRAP01903 AC068587.6-202ENST00000641839 5619 ntBASIC16.64■□□□□ 0.25
HLA-DRAP01903 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DRAP01903 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DRAP01903 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HLA-DRAP01903 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HLA-DRAP01903 INTS4P2-202ENST00000614726 2019 ntBASIC16.63■□□□□ 0.25
HLA-DRAP01903 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 AC104457.1-201ENST00000401024 814 ntBASIC16.63■□□□□ 0.25
HLA-DRAP01903 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 RPL13AP25-201ENST00000484130 612 ntBASIC16.63■□□□□ 0.25
HLA-DRAP01903 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 AC120045.2-201ENST00000567334 178 ntBASIC16.63■□□□□ 0.25
HLA-DRAP01903 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 TMEM261P1-201ENST00000604899 340 ntBASIC16.63■□□□□ 0.25
HLA-DRAP01903 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.63■□□□□ 0.25
HLA-DRAP01903 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DRAP01903 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DRAP01903 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DRAP01903 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-DRAP01903 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-DRAP01903 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DRAP01903 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
HLA-DRAP01903 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DRAP01903 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DRAP01903 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DRAP01903 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DRAP01903 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DRAP01903 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DRAP01903 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DRAP01903 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HLA-DRAP01903 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
HLA-DRAP01903 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DRAP01903 AC134915.1-201ENST00000426461 574 ntBASIC16.62■□□□□ 0.25
HLA-DRAP01903 AL442647.2-201ENST00000429864 857 ntBASIC16.62■□□□□ 0.25
HLA-DRAP01903 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-DRAP01903 TP53TG3HP-202ENST00000569755 579 ntBASIC16.62■□□□□ 0.25
HLA-DRAP01903 SPDYE22P-201ENST00000582158 798 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms