Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 ARL4AP4-201ENST00000434170 518 ntBASIC16.5■□□□□ 0.23
RCCD1A6NED2 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 AC040169.1-201ENST00000565382 521 ntBASIC16.5■□□□□ 0.23
RCCD1A6NED2 AC015910.1-201ENST00000579400 975 ntBASIC16.5■□□□□ 0.23
RCCD1A6NED2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 RN7SL828P-201ENST00000607615 303 ntBASIC16.5■□□□□ 0.23
RCCD1A6NED2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RCCD1A6NED2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RCCD1A6NED2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.49■□□□□ 0.23
RCCD1A6NED2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RCCD1A6NED2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RCCD1A6NED2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 AC104457.1-201ENST00000401024 814 ntBASIC16.48■□□□□ 0.23
RCCD1A6NED2 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 AC004832.2-201ENST00000426397 482 ntBASIC16.48■□□□□ 0.23
RCCD1A6NED2 MKNK2P1-201ENST00000437526 628 ntBASIC16.48■□□□□ 0.23
RCCD1A6NED2 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.48■□□□□ 0.23
RCCD1A6NED2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RCCD1A6NED2 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms