Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 AC105206.1-202ENST00000314927 2368 ntBASIC13.53□□□□□ -0.24
SHISA3A0PJX4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 DGCR9-201ENST00000609630 2415 ntBASIC13.53□□□□□ -0.24
SHISA3A0PJX4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 AC138969.3-201ENST00000546612 1459 ntBASIC13.53□□□□□ -0.24
SHISA3A0PJX4 AC138932.2-201ENST00000548268 1459 ntBASIC13.53□□□□□ -0.24
SHISA3A0PJX4 AC126755.4-201ENST00000549796 1459 ntBASIC13.53□□□□□ -0.24
SHISA3A0PJX4 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
SHISA3A0PJX4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.52□□□□□ -0.24
SHISA3A0PJX4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHISA3A0PJX4 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHISA3A0PJX4 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
SHISA3A0PJX4 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.52□□□□□ -0.24
SHISA3A0PJX4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHISA3A0PJX4 COL6A4P2-202ENST00000504443 2753 ntBASIC13.52□□□□□ -0.24
SHISA3A0PJX4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
SHISA3A0PJX4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SHISA3A0PJX4 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 AC018845.2-201ENST00000568326 409 ntBASIC13.52□□□□□ -0.25
SHISA3A0PJX4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SHISA3A0PJX4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 AC099521.3-201ENST00000624251 2938 ntBASIC13.51□□□□□ -0.25
SHISA3A0PJX4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SHISA3A0PJX4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms