Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 MIR4783-201ENST00000580343 82 ntBASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 AL136295.7-201ENST00000619226 1200 ntBASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTCH2Q9Y6C5 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 RN7SKP214-201ENST00000364208 315 ntBASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 AC051619.9-201ENST00000623237 597 ntBASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 AC007787.1-201ENST00000588095 1583 ntBASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.28■□□□□ 0.36
PTCH2Q9Y6C5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 ALOX12P2-203ENST00000570921 1945 ntBASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 AL627231.1-201ENST00000394467 1125 ntBASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 RPL18P13-201ENST00000478088 569 ntBASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 NAP1L6-202ENST00000641404 1222 ntBASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PTCH2Q9Y6C5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTCH2Q9Y6C5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTCH2Q9Y6C5 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
PTCH2Q9Y6C5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.27■□□□□ 0.35
PTCH2Q9Y6C5 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
PTCH2Q9Y6C5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
PTCH2Q9Y6C5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 AL645937.2-201ENST00000396808 931 ntBASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 RPS9P1-201ENST00000419943 583 ntBASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTCH2Q9Y6C5 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms