Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
TRAPPC1Q9Y5R8 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 USO1-201ENST00000264904 4135 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 MIR662-201ENST00000384847 95 ntBASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 GUSBP12-201ENST00000513727 720 ntBASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 AC087641.1-201ENST00000557561 1021 ntBASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 FITM1-202ENST00000559294 800 ntBASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 AL390719.2-201ENST00000606993 987 ntBASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 FAM197Y4-202ENST00000622692 608 ntBASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 AC023090.2-201ENST00000625182 2110 ntBASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 AC018529.2-202ENST00000611482 3087 ntBASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TRAPPC1Q9Y5R8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 AC134407.2-201ENST00000625089 1978 ntBASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 CTNS-203ENST00000399306 803 ntTSL 3 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 AL390955.1-201ENST00000428694 934 ntBASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC11.78□□□□□ -0.52
TRAPPC1Q9Y5R8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms