Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHB7Q9Y5E2 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.25
PCDHB7Q9Y5E2 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 AC020914.3-201ENST00000594712 304 ntBASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 AC138028.6-201ENST00000616106 1482 ntBASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCDHB7Q9Y5E2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 AC127383.1-201ENST00000444697 1800 ntBASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 AL023775.1-201ENST00000454907 1746 ntBASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 FNTAP2-201ENST00000430308 634 ntBASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 AC091804.1-201ENST00000486888 567 ntBASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 COX5BP1-201ENST00000507622 393 ntBASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 SCARNA20.5-201ENST00000516991 142 ntBASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHB7Q9Y5E2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHB7Q9Y5E2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms