Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 DUX4L33-201ENST00000635217 958 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AL603764.1-201ENST00000636452 321 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 RN7SL33P-201ENST00000462543 342 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 BX322534.1-201ENST00000635574 241 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AC215524.1-201ENST00000635696 241 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 SHMT1P1-201ENST00000419974 1312 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 SIRPB3P-201ENST00000340424 1216 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 MIR4726-201ENST00000615971 58 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AC010531.8-201ENST00000623341 685 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 RACK1-227ENST00000512805 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 RN7SL564P-201ENST00000496309 250 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AC112504.1-201ENST00000623415 1841 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 OR4C14P-201ENST00000440929 923 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 AC022188.1-201ENST00000620960 1664 ntBASIC6.1□□□□□ -1.43
MACF1Q9UPN3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC6.1□□□□□ -1.43
MACF1Q9UPN3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AL392185.1-201ENST00000419620 395 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 AL031773.1-201ENST00000453579 554 ntTSL 3 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC6.09□□□□□ -1.43
MACF1Q9UPN3 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms