Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC68Q9H2F9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC68Q9H2F9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CCDC68Q9H2F9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CCDC68Q9H2F9 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.65■□□□□ 0.1
CCDC68Q9H2F9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
CCDC68Q9H2F9 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.1
CCDC68Q9H2F9 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 AL109954.1-202ENST00000564051 2148 ntBASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 AC009090.5-201ENST00000624886 2285 ntBASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 AC138035.3-201ENST00000622706 2791 ntBASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CCDC68Q9H2F9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.63■□□□□ 0.09
CCDC68Q9H2F9 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CCDC68Q9H2F9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms