Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC3Q9BY71 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 GOLGA2P4-201ENST00000441462 777 ntBASIC16.11■□□□□ 0.17
LRRC3Q9BY71 AL590640.2-201ENST00000457038 527 ntBASIC16.11■□□□□ 0.17
LRRC3Q9BY71 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 RNA5SP486-201ENST00000515961 83 ntBASIC16.11■□□□□ 0.17
LRRC3Q9BY71 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 AC138951.2-201ENST00000623455 1161 ntBASIC16.11■□□□□ 0.17
LRRC3Q9BY71 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.11■□□□□ 0.17
LRRC3Q9BY71 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC3Q9BY71 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 AC084364.1-201ENST00000551967 1556 ntBASIC16.1■□□□□ 0.17
LRRC3Q9BY71 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.1■□□□□ 0.17
LRRC3Q9BY71 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 CD8B2-202ENST00000417670 633 ntBASIC16.1■□□□□ 0.17
LRRC3Q9BY71 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 AL606495.2-201ENST00000605867 535 ntBASIC16.1■□□□□ 0.17
LRRC3Q9BY71 AC006453.4-201ENST00000636949 1252 ntBASIC16.1■□□□□ 0.17
LRRC3Q9BY71 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LRRC3Q9BY71 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms