Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.04□□□□□ -0.16
USB1Q9BQ65 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USB1Q9BQ65 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 AL390039.1-201ENST00000399148 611 ntBASIC14.03□□□□□ -0.16
USB1Q9BQ65 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.03□□□□□ -0.16
USB1Q9BQ65 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 DFFBP1-201ENST00000433250 979 ntBASIC14.03□□□□□ -0.16
USB1Q9BQ65 SDR42E1P3-201ENST00000438345 502 ntBASIC14.03□□□□□ -0.16
USB1Q9BQ65 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 SPTLC1P1-201ENST00000447199 261 ntBASIC14.03□□□□□ -0.16
USB1Q9BQ65 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 AC104629.1-201ENST00000494226 508 ntBASIC14.03□□□□□ -0.16
USB1Q9BQ65 SERBP1P5-201ENST00000510079 1181 ntBASIC14.03□□□□□ -0.16
USB1Q9BQ65 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 AC008147.4-201ENST00000617570 1204 ntBASIC14.03□□□□□ -0.16
USB1Q9BQ65 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USB1Q9BQ65 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
USB1Q9BQ65 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.02□□□□□ -0.16
USB1Q9BQ65 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
USB1Q9BQ65 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.02□□□□□ -0.16
USB1Q9BQ65 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.02□□□□□ -0.16
USB1Q9BQ65 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
USB1Q9BQ65 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.02□□□□□ -0.16
USB1Q9BQ65 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.02□□□□□ -0.16
USB1Q9BQ65 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.02□□□□□ -0.16
USB1Q9BQ65 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.02□□□□□ -0.16
USB1Q9BQ65 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
USB1Q9BQ65 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC14.02□□□□□ -0.16
USB1Q9BQ65 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
USB1Q9BQ65 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 PSMC1P2-201ENST00000423961 1204 ntBASIC14.02□□□□□ -0.17
USB1Q9BQ65 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
USB1Q9BQ65 CRB3P1-201ENST00000449338 276 ntBASIC14.02□□□□□ -0.17
USB1Q9BQ65 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
USB1Q9BQ65 TIMM17BP1-201ENST00000545713 516 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms