Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 EMD-201ENST00000369835 966 ntTSL 3 BASIC10.33□□□□□ -0.76
LITAFQ99732 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC10.33□□□□□ -0.76
LITAFQ99732 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 RCN1P1-201ENST00000400413 996 ntBASIC10.33□□□□□ -0.76
LITAFQ99732 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 RPS8P6-201ENST00000426177 609 ntBASIC10.33□□□□□ -0.76
LITAFQ99732 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC10.33□□□□□ -0.76
LITAFQ99732 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC10.33□□□□□ -0.76
LITAFQ99732 PTK2-216ENST00000519881 863 ntTSL 3 BASIC10.33□□□□□ -0.76
LITAFQ99732 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 AC012615.1-201ENST00000565797 1299 ntBASIC10.33□□□□□ -0.76
LITAFQ99732 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 AC061975.2-201ENST00000581722 295 ntBASIC10.33□□□□□ -0.76
LITAFQ99732 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 ST20-AS1-201ENST00000560255 4223 ntBASIC10.33□□□□□ -0.76
LITAFQ99732 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.33□□□□□ -0.76
LITAFQ99732 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
LITAFQ99732 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
LITAFQ99732 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LITAFQ99732 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 AC020658.7-201ENST00000624274 2442 ntBASIC10.32□□□□□ -0.76
LITAFQ99732 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC10.32□□□□□ -0.76
LITAFQ99732 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
LITAFQ99732 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LITAFQ99732 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.32□□□□□ -0.76
LITAFQ99732 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms