Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC15.22■□□□□ 0.03
RAB3IPQ96QF0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 SPDYE13P-201ENST00000445314 798 ntBASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 ABCD1P5-201ENST00000445663 754 ntBASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RAB3IPQ96QF0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB3IPQ96QF0 AC018892.3-201ENST00000623986 2499 ntBASIC15.21■□□□□ 0.02
RAB3IPQ96QF0 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB3IPQ96QF0 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RAB3IPQ96QF0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 AL645929.1-201ENST00000420084 975 ntBASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 MINOS1P3-201ENST00000457048 203 ntBASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 AP002469.2-201ENST00000531724 424 ntBASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 AP005901.3-202ENST00000581653 237 ntBASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 MIR193BHG-211ENST00000641433 5365 ntBASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RAB3IPQ96QF0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms