Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 IGHV3-42-201ENST00000520410 361 ntBASIC14.74□□□□□ -0.05
COL21A1Q96P44 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 AC027796.2-201ENST00000575326 344 ntBASIC14.74□□□□□ -0.05
COL21A1Q96P44 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
COL21A1Q96P44 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL21A1Q96P44 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 AL080243.2-201ENST00000418783 582 ntBASIC14.73□□□□□ -0.05
COL21A1Q96P44 AC055876.3-201ENST00000431496 288 ntBASIC14.73□□□□□ -0.05
COL21A1Q96P44 EEF1DP4-201ENST00000446006 880 ntBASIC14.73□□□□□ -0.05
COL21A1Q96P44 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 AC138649.4-201ENST00000612222 287 ntBASIC14.73□□□□□ -0.05
COL21A1Q96P44 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
COL21A1Q96P44 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL21A1Q96P44 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 AC091951.1-201ENST00000512854 2465 ntBASIC14.72□□□□□ -0.05
COL21A1Q96P44 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 FO393414.2-201ENST00000405153 598 ntBASIC14.72□□□□□ -0.05
COL21A1Q96P44 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 AC092580.3-201ENST00000430932 139 ntBASIC14.72□□□□□ -0.05
COL21A1Q96P44 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL21A1Q96P44 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.72□□□□□ -0.05
COL21A1Q96P44 TEX28P1-201ENST00000613479 1221 ntBASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms