Protein–RNA interactions for Protein: Q96EP9

SLC10A4, Sodium/bile acid cotransporter 4, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC10A4Q96EP9 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC10A4Q96EP9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 PUDPP3-201ENST00000445368 636 ntBASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 AC100827.2-201ENST00000563214 1194 ntBASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 SAMD11P1-201ENST00000571429 661 ntBASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 AC090164.2-201ENST00000611487 516 ntBASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 AC011491.1-203ENST00000637688 543 ntBASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC10A4Q96EP9 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 FKBP4P6-201ENST00000457486 1332 ntBASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 AC055811.4-201ENST00000624039 1754 ntBASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 AL355334.1-201ENST00000417713 215 ntBASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 AL136301.1-201ENST00000615830 422 ntBASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 AC103691.2-201ENST00000618824 433 ntBASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 COX6A1P2-201ENST00000620597 330 ntBASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 AL162426.1-201ENST00000624141 743 ntBASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 AC006453.1-201ENST00000636037 1257 ntBASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 HLA-C-210ENST00000640219 976 ntBASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC10A4Q96EP9 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC10A4Q96EP9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SLC10A4Q96EP9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLC10A4Q96EP9 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC10A4Q96EP9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.77■□□□□ 0.43
SLC10A4Q96EP9 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC10A4Q96EP9 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
SLC10A4Q96EP9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SLC10A4Q96EP9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLC10A4Q96EP9 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
SLC10A4Q96EP9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC10A4Q96EP9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC10A4Q96EP9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLC10A4Q96EP9 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLC10A4Q96EP9 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms