Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.8■□□□□ 0.12
RTP4Q96DX8 AL391069.4-201ENST00000609583 481 ntBASIC15.8■□□□□ 0.12
RTP4Q96DX8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RTP4Q96DX8 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RTP4Q96DX8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 AC100757.3-201ENST00000622361 1406 ntBASIC15.79■□□□□ 0.12
RTP4Q96DX8 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 LINC00552-201ENST00000625151 2579 ntBASIC15.79■□□□□ 0.12
RTP4Q96DX8 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 TSSK5P-201ENST00000423978 907 ntBASIC15.79■□□□□ 0.12
RTP4Q96DX8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 AC009477.1-201ENST00000452936 217 ntBASIC15.79■□□□□ 0.12
RTP4Q96DX8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 AL590560.3-201ENST00000623350 461 ntBASIC15.79■□□□□ 0.12
RTP4Q96DX8 AC004461.2-201ENST00000629517 803 ntBASIC15.79■□□□□ 0.12
RTP4Q96DX8 AC105233.6-201ENST00000642093 218 ntBASIC15.79■□□□□ 0.12
RTP4Q96DX8 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 CICP14-201ENST00000629111 2732 ntBASIC15.79■□□□□ 0.12
RTP4Q96DX8 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RTP4Q96DX8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
RTP4Q96DX8 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.78■□□□□ 0.12
RTP4Q96DX8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 GAPDHP40-201ENST00000505218 1006 ntBASIC15.78■□□□□ 0.12
RTP4Q96DX8 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 LINC02560-201ENST00000596379 459 ntBASIC15.78■□□□□ 0.12
RTP4Q96DX8 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 AC008761.3-201ENST00000624803 892 ntBASIC15.78■□□□□ 0.12
RTP4Q96DX8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
RTP4Q96DX8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RTP4Q96DX8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms