Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 AC134684.3-201ENST00000641758 218 ntBASIC14□□□□□ -0.17
PTP4A1Q93096 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PTP4A1Q93096 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14□□□□□ -0.17
PTP4A1Q93096 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
PTP4A1Q93096 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 AC063926.3-201ENST00000624734 5658 ntBASIC14□□□□□ -0.17
PTP4A1Q93096 PCDHGB8P-201ENST00000502926 1973 ntBASIC14□□□□□ -0.17
PTP4A1Q93096 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14□□□□□ -0.17
PTP4A1Q93096 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14□□□□□ -0.17
PTP4A1Q93096 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 AC079781.5-202ENST00000641784 3743 ntBASIC13.99□□□□□ -0.17
PTP4A1Q93096 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 SPDYE17-201ENST00000412399 783 ntBASIC13.99□□□□□ -0.17
PTP4A1Q93096 AL627223.1-201ENST00000416693 442 ntBASIC13.99□□□□□ -0.17
PTP4A1Q93096 CNN2P11-201ENST00000429351 262 ntBASIC13.99□□□□□ -0.17
PTP4A1Q93096 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 AC105021.1-202ENST00000570572 669 ntBASIC13.99□□□□□ -0.17
PTP4A1Q93096 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PTP4A1Q93096 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.99□□□□□ -0.17
PTP4A1Q93096 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PTP4A1Q93096 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
PTP4A1Q93096 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms