Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 AC079776.1-201ENST00000401540 1152 ntBASIC16.42■□□□□ 0.22
ATP2A3Q93084 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 LINC01115-203ENST00000606068 577 ntBASIC16.42■□□□□ 0.22
ATP2A3Q93084 AL033527.5-201ENST00000641382 801 ntBASIC16.42■□□□□ 0.22
ATP2A3Q93084 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.42■□□□□ 0.22
ATP2A3Q93084 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.42■□□□□ 0.22
ATP2A3Q93084 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
ATP2A3Q93084 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 MYO15B-237ENST00000642007 4893 ntBASIC16.41■□□□□ 0.22
ATP2A3Q93084 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 AC112492.5-201ENST00000421897 457 ntBASIC16.41■□□□□ 0.22
ATP2A3Q93084 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 AC092552.1-201ENST00000547243 906 ntBASIC16.41■□□□□ 0.22
ATP2A3Q93084 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 AC069224.1-201ENST00000566372 1715 ntBASIC16.41■□□□□ 0.22
ATP2A3Q93084 AC022532.1-201ENST00000624563 1728 ntBASIC16.41■□□□□ 0.22
ATP2A3Q93084 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
ATP2A3Q93084 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
ATP2A3Q93084 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
ATP2A3Q93084 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 RPL13P2-201ENST00000440687 659 ntBASIC16.4■□□□□ 0.22
ATP2A3Q93084 RN7SL399P-201ENST00000471648 279 ntBASIC16.4■□□□□ 0.22
ATP2A3Q93084 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.4■□□□□ 0.22
ATP2A3Q93084 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms