Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
RFWD2Q8NHY2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 WASH3P-207ENST00000560956 1394 ntBASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 FO538757.1-201ENST00000623083 1397 ntBASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 IGLL3P-201ENST00000412472 434 ntBASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 AC061975.2-201ENST00000581722 295 ntBASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RFWD2Q8NHY2 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 AL450472.2-201ENST00000603663 1156 ntBASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RFWD2Q8NHY2 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms