Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SCUBE3Q8IX30 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 RPL5P21-201ENST00000404620 815 ntBASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 AC022494.1-201ENST00000466044 728 ntBASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 AC104596.2-201ENST00000512793 793 ntBASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 AC008494.3-201ENST00000606615 944 ntBASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 AC093726.1-201ENST00000608064 963 ntBASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 AL662799.1-202ENST00000614205 422 ntBASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SCUBE3Q8IX30 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 AL109954.1-202ENST00000564051 2148 ntBASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 AC007431.3-201ENST00000623221 587 ntBASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SCUBE3Q8IX30 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 MST1L-201ENST00000442552 2185 ntBASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCUBE3Q8IX30 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms