Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRIM48Q8IWZ4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AC098850.1-201ENST00000419919 790 ntBASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AL513523.2-202ENST00000427283 2040 ntBASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 KRT18P43-201ENST00000469825 1281 ntBASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 RPL13AP25-201ENST00000484130 612 ntBASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 CTBP2P3-201ENST00000585629 1255 ntBASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 TMEM261P1-201ENST00000604899 340 ntBASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRIM48Q8IWZ4 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRIM48Q8IWZ4 AC144831.1-201ENST00000573312 2656 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms