Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LYSMD2Q8IV50 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 AC018892.3-201ENST00000623986 2499 ntBASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LYSMD2Q8IV50 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 AC006504.4-201ENST00000592118 1568 ntBASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 RCN1P1-201ENST00000400413 996 ntBASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 RN7SL850P-201ENST00000579959 291 ntBASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 AC066615.1-201ENST00000640911 628 ntBASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 AL805961.1-202ENST00000641562 540 ntBASIC13.67□□□□□ -0.22
LYSMD2Q8IV50 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms