Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PCDH1Q08174 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15□□□□□ -0.01
PCDH1Q08174 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15□□□□□ -0.01
PCDH1Q08174 HLA-DRB6-201ENST00000411500 1235 ntBASIC15□□□□□ -0.01
PCDH1Q08174 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15□□□□□ -0.01
PCDH1Q08174 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15□□□□□ -0.01
PCDH1Q08174 HNRNPA3P5-201ENST00000455201 833 ntBASIC15□□□□□ -0.01
PCDH1Q08174 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15□□□□□ -0.01
PCDH1Q08174 AC004890.2-204ENST00000481968 304 ntBASIC15□□□□□ -0.01
PCDH1Q08174 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15□□□□□ -0.01
PCDH1Q08174 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
PCDH1Q08174 DUX4L27-201ENST00000554796 1261 ntBASIC15□□□□□ -0.01
PCDH1Q08174 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15□□□□□ -0.01
PCDH1Q08174 AC004461.2-201ENST00000629517 803 ntBASIC15□□□□□ -0.01
PCDH1Q08174 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15□□□□□ -0.01
PCDH1Q08174 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PCDH1Q08174 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
PCDH1Q08174 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15□□□□□ -0.01
PCDH1Q08174 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15□□□□□ -0.01
PCDH1Q08174 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PCDH1Q08174 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15□□□□□ -0.01
PCDH1Q08174 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15□□□□□ -0.01
PCDH1Q08174 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
PCDH1Q08174 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
PCDH1Q08174 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.99□□□□□ -0.01
PCDH1Q08174 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDH1Q08174 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDH1Q08174 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
PCDH1Q08174 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
PCDH1Q08174 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDH1Q08174 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.99□□□□□ -0.01
PCDH1Q08174 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PCDH1Q08174 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PCDH1Q08174 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.99□□□□□ -0.01
PCDH1Q08174 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.99□□□□□ -0.01
PCDH1Q08174 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
PCDH1Q08174 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.99□□□□□ -0.01
PCDH1Q08174 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 AC025181.2-201ENST00000606994 802 ntBASIC14.99□□□□□ -0.01
PCDH1Q08174 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
PCDH1Q08174 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 TNRC18P2-201ENST00000417666 2714 ntBASIC14.99□□□□□ -0.01
PCDH1Q08174 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
PCDH1Q08174 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PCDH1Q08174 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.99□□□□□ -0.01
PCDH1Q08174 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
PCDH1Q08174 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDH1Q08174 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 ZBED1P1-201ENST00000502364 1930 ntBASIC14.98□□□□□ -0.01
PCDH1Q08174 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
PCDH1Q08174 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.98□□□□□ -0.01
PCDH1Q08174 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
PCDH1Q08174 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.98□□□□□ -0.01
PCDH1Q08174 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
PCDH1Q08174 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms