Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
CHRNB3Q05901 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 YBX2P1-201ENST00000394192 760 ntBASIC14.78□□□□□ -0.04
CHRNB3Q05901 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.78□□□□□ -0.04
CHRNB3Q05901 FAM8A3P-201ENST00000427218 844 ntBASIC14.78□□□□□ -0.04
CHRNB3Q05901 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.78□□□□□ -0.04
CHRNB3Q05901 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.78□□□□□ -0.04
CHRNB3Q05901 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CHRNB3Q05901 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.77□□□□□ -0.04
CHRNB3Q05901 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
CHRNB3Q05901 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.77□□□□□ -0.04
CHRNB3Q05901 AC140479.7-201ENST00000636301 2332 ntBASIC14.77□□□□□ -0.04
CHRNB3Q05901 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.77□□□□□ -0.04
CHRNB3Q05901 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 INTS4P1-203ENST00000641008 3683 ntBASIC14.77□□□□□ -0.04
CHRNB3Q05901 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.77□□□□□ -0.04
CHRNB3Q05901 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CHRNB3Q05901 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 AC004987.2-201ENST00000395959 1148 ntBASIC14.77□□□□□ -0.05
CHRNB3Q05901 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 AC010327.4-202ENST00000591484 748 ntBASIC14.77□□□□□ -0.05
CHRNB3Q05901 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.77□□□□□ -0.05
CHRNB3Q05901 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.77□□□□□ -0.05
CHRNB3Q05901 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CHRNB3Q05901 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms