Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
WNT3P56703 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
WNT3P56703 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.7□□□□□ -0.06
WNT3P56703 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
WNT3P56703 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3P56703 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
WNT3P56703 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3P56703 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3P56703 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3P56703 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
WNT3P56703 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.69□□□□□ -0.06
WNT3P56703 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3P56703 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.69□□□□□ -0.06
WNT3P56703 AL512361.1-201ENST00000554200 418 ntBASIC14.69□□□□□ -0.06
WNT3P56703 AC138761.1-201ENST00000584393 385 ntBASIC14.69□□□□□ -0.06
WNT3P56703 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.69□□□□□ -0.06
WNT3P56703 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 LINC01115-203ENST00000606068 577 ntBASIC14.69□□□□□ -0.06
WNT3P56703 AJ011932.1-201ENST00000621707 465 ntBASIC14.69□□□□□ -0.06
WNT3P56703 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3P56703 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
WNT3P56703 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3P56703 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3P56703 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
WNT3P56703 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3P56703 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3P56703 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3P56703 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.69□□□□□ -0.06
WNT3P56703 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
WNT3P56703 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.69□□□□□ -0.06
WNT3P56703 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3P56703 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.68□□□□□ -0.06
WNT3P56703 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 AC007191.1-201ENST00000623179 2995 ntBASIC14.68□□□□□ -0.06
WNT3P56703 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 CICP14-201ENST00000629111 2732 ntBASIC14.68□□□□□ -0.06
WNT3P56703 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
WNT3P56703 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
WNT3P56703 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
WNT3P56703 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
WNT3P56703 AL133267.1-201ENST00000398220 340 ntBASIC14.68□□□□□ -0.06
WNT3P56703 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.68□□□□□ -0.06
WNT3P56703 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.68□□□□□ -0.06
WNT3P56703 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.68□□□□□ -0.06
WNT3P56703 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.68□□□□□ -0.06
WNT3P56703 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3P56703 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
WNT3P56703 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3P56703 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
WNT3P56703 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.68□□□□□ -0.06
WNT3P56703 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3P56703 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
WNT3P56703 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.68□□□□□ -0.06
WNT3P56703 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms