Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF144AP50876 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RNF144AP50876 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 PCDHA3-202ENST00000532566 4594 ntBASIC14.52□□□□□ -0.09
RNF144AP50876 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC14.52□□□□□ -0.09
RNF144AP50876 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RNF144AP50876 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.52□□□□□ -0.09
RNF144AP50876 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RNF144AP50876 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.51□□□□□ -0.09
RNF144AP50876 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.51□□□□□ -0.09
RNF144AP50876 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RNF144AP50876 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.51□□□□□ -0.09
RNF144AP50876 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.51□□□□□ -0.09
RNF144AP50876 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RNF144AP50876 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
RNF144AP50876 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.51□□□□□ -0.09
RNF144AP50876 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.51□□□□□ -0.09
RNF144AP50876 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.51□□□□□ -0.09
RNF144AP50876 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.51□□□□□ -0.09
RNF144AP50876 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.51□□□□□ -0.09
RNF144AP50876 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.51□□□□□ -0.09
RNF144AP50876 AC097493.3-201ENST00000509725 367 ntBASIC14.51□□□□□ -0.09
RNF144AP50876 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.51□□□□□ -0.09
RNF144AP50876 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 LINC01115-203ENST00000606068 577 ntBASIC14.51□□□□□ -0.09
RNF144AP50876 AL033527.5-202ENST00000641632 1098 ntBASIC14.51□□□□□ -0.09
RNF144AP50876 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RNF144AP50876 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.51□□□□□ -0.09
RNF144AP50876 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RNF144AP50876 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RNF144AP50876 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 AC007686.3-201ENST00000619017 3487 ntBASIC14.5□□□□□ -0.09
RNF144AP50876 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
RNF144AP50876 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
RNF144AP50876 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
RNF144AP50876 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF144AP50876 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF144AP50876 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
RNF144AP50876 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF144AP50876 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF144AP50876 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF144AP50876 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 AC092183.1-201ENST00000469884 875 ntBASIC14.5□□□□□ -0.09
RNF144AP50876 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.5□□□□□ -0.09
RNF144AP50876 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.5□□□□□ -0.09
RNF144AP50876 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.5□□□□□ -0.09
RNF144AP50876 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.5□□□□□ -0.09
RNF144AP50876 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.5□□□□□ -0.09
RNF144AP50876 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
RNF144AP50876 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms