Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 KRT18P21-201ENST00000515767 1272 ntBASIC13.48□□□□□ -0.25
CBX5P45973 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC13.48□□□□□ -0.25
CBX5P45973 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CBX5P45973 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.48□□□□□ -0.25
CBX5P45973 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CBX5P45973 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 AL009183.1-201ENST00000603760 355 ntBASIC13.48□□□□□ -0.25
CBX5P45973 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.48□□□□□ -0.25
CBX5P45973 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CBX5P45973 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.48□□□□□ -0.25
CBX5P45973 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CBX5P45973 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.48□□□□□ -0.25
CBX5P45973 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.48□□□□□ -0.25
CBX5P45973 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.48□□□□□ -0.25
CBX5P45973 AC148477.4-201ENST00000613430 1793 ntBASIC13.48□□□□□ -0.25
CBX5P45973 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CBX5P45973 AC232323.1-201ENST00000540724 2099 ntBASIC13.48□□□□□ -0.25
CBX5P45973 REXO1L5P-201ENST00000622260 2098 ntBASIC13.48□□□□□ -0.25
CBX5P45973 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CBX5P45973 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.47□□□□□ -0.25
CBX5P45973 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CBX5P45973 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CBX5P45973 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CBX5P45973 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.47□□□□□ -0.25
CBX5P45973 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CBX5P45973 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CBX5P45973 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.47□□□□□ -0.25
CBX5P45973 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.47□□□□□ -0.25
CBX5P45973 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.47□□□□□ -0.25
CBX5P45973 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 AC093458.2-201ENST00000623150 629 ntBASIC13.47□□□□□ -0.25
CBX5P45973 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.47□□□□□ -0.25
CBX5P45973 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 CICP17-201ENST00000418553 2377 ntBASIC13.47□□□□□ -0.25
CBX5P45973 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.47□□□□□ -0.25
CBX5P45973 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CBX5P45973 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.47□□□□□ -0.25
CBX5P45973 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CBX5P45973 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CBX5P45973 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CBX5P45973 AP000845.1-201ENST00000581677 2131 ntBASIC13.46□□□□□ -0.25
CBX5P45973 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CBX5P45973 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CBX5P45973 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CBX5P45973 AC127383.1-201ENST00000444697 1800 ntBASIC13.46□□□□□ -0.25
CBX5P45973 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CBX5P45973 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CBX5P45973 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CBX5P45973 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CBX5P45973 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.46□□□□□ -0.25
CBX5P45973 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
CBX5P45973 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CBX5P45973 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.46□□□□□ -0.25
CBX5P45973 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CBX5P45973 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CBX5P45973 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms