Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CXCL5P42830 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
CXCL5P42830 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CXCL5P42830 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.55□□□□□ -0.72
CXCL5P42830 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC10.55□□□□□ -0.72
CXCL5P42830 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
CXCL5P42830 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CXCL5P42830 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
CXCL5P42830 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CXCL5P42830 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CXCL5P42830 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC10.55□□□□□ -0.72
CXCL5P42830 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.55□□□□□ -0.72
CXCL5P42830 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
CXCL5P42830 AMT-204ENST00000427987 1646 ntTSL 5 BASIC10.55□□□□□ -0.72
CXCL5P42830 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 AGAP7P-201ENST00000582299 2062 ntBASIC10.54□□□□□ -0.72
CXCL5P42830 AGAP14-201ENST00000624701 2060 ntBASIC10.54□□□□□ -0.72
CXCL5P42830 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
CXCL5P42830 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 WASH3P-207ENST00000560956 1394 ntBASIC10.54□□□□□ -0.72
CXCL5P42830 FO538757.1-201ENST00000623083 1397 ntBASIC10.54□□□□□ -0.72
CXCL5P42830 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC10.54□□□□□ -0.72
CXCL5P42830 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 AC002056.1-201ENST00000395613 760 ntBASIC10.54□□□□□ -0.72
CXCL5P42830 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 CENPM-204ENST00000402420 688 ntTSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 FAM8A3P-201ENST00000427218 844 ntBASIC10.54□□□□□ -0.72
CXCL5P42830 CRCP-205ENST00000431089 942 ntTSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 HCG4B-203ENST00000450128 991 ntBASIC10.54□□□□□ -0.72
CXCL5P42830 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 SKP2-204ENST00000508514 821 ntTSL 3 BASIC10.54□□□□□ -0.72
CXCL5P42830 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC10.54□□□□□ -0.72
CXCL5P42830 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC10.54□□□□□ -0.72
CXCL5P42830 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 AC026979.3-201ENST00000607315 403 ntBASIC10.54□□□□□ -0.72
CXCL5P42830 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.54□□□□□ -0.72
CXCL5P42830 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.54□□□□□ -0.72
CXCL5P42830 FAM215A-202ENST00000632077 792 ntBASIC10.54□□□□□ -0.72
CXCL5P42830 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 AC005912.2-201ENST00000619492 2400 ntBASIC10.54□□□□□ -0.72
CXCL5P42830 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
CXCL5P42830 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
CXCL5P42830 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
CXCL5P42830 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
CXCL5P42830 AL390755.1-201ENST00000623716 2027 ntBASIC10.53□□□□□ -0.72
CXCL5P42830 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.53□□□□□ -0.72
CXCL5P42830 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC10.53□□□□□ -0.72
CXCL5P42830 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms