Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC5P40937 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC5P40937 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
RFC5P40937 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.1■□□□□ 0.33
RFC5P40937 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.1■□□□□ 0.33
RFC5P40937 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RFC5P40937 AC020658.6-201ENST00000623564 1870 ntBASIC17.1■□□□□ 0.33
RFC5P40937 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.09■□□□□ 0.33
RFC5P40937 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
RFC5P40937 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFC5P40937 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.09■□□□□ 0.33
RFC5P40937 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
RFC5P40937 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC17.09■□□□□ 0.33
RFC5P40937 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.09■□□□□ 0.33
RFC5P40937 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.09■□□□□ 0.33
RFC5P40937 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC17.09■□□□□ 0.33
RFC5P40937 AC234783.1-201ENST00000441761 496 ntBASIC17.09■□□□□ 0.33
RFC5P40937 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.09■□□□□ 0.33
RFC5P40937 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.09■□□□□ 0.33
RFC5P40937 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RFC5P40937 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RFC5P40937 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.09■□□□□ 0.33
RFC5P40937 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RFC5P40937 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RFC5P40937 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFC5P40937 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
RFC5P40937 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFC5P40937 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFC5P40937 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.08■□□□□ 0.33
RFC5P40937 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RFC5P40937 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFC5P40937 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RFC5P40937 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.08■□□□□ 0.33
RFC5P40937 AC007950.2-201ENST00000615045 2347 ntBASIC17.08■□□□□ 0.33
RFC5P40937 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFC5P40937 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RFC5P40937 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.08■□□□□ 0.33
RFC5P40937 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.08■□□□□ 0.33
RFC5P40937 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RFC5P40937 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
RFC5P40937 AL645937.2-201ENST00000396808 931 ntBASIC17.08■□□□□ 0.32
RFC5P40937 ATP5G2P4-201ENST00000442175 420 ntBASIC17.08■□□□□ 0.32
RFC5P40937 KRT18P25-201ENST00000508931 1278 ntBASIC17.08■□□□□ 0.32
RFC5P40937 IGHV3-71-201ENST00000523324 359 ntBASIC17.08■□□□□ 0.32
RFC5P40937 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.08■□□□□ 0.32
RFC5P40937 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.08■□□□□ 0.32
RFC5P40937 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.08■□□□□ 0.32
RFC5P40937 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RFC5P40937 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
RFC5P40937 AL512343.1-201ENST00000605837 169 ntBASIC17.08■□□□□ 0.32
RFC5P40937 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.08■□□□□ 0.32
RFC5P40937 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.08■□□□□ 0.32
RFC5P40937 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.08■□□□□ 0.32
RFC5P40937 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RFC5P40937 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RFC5P40937 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC5P40937 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.07■□□□□ 0.32
RFC5P40937 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.07■□□□□ 0.32
RFC5P40937 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC5P40937 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RFC5P40937 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.07■□□□□ 0.32
RFC5P40937 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
RFC5P40937 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms