Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.41■□□□□ 0.22
RFC1P35251 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RFC1P35251 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.41■□□□□ 0.22
RFC1P35251 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFC1P35251 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
RFC1P35251 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC1P35251 AC126365.1-201ENST00000578585 1514 ntBASIC16.4■□□□□ 0.22
RFC1P35251 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC1P35251 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC1P35251 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.4■□□□□ 0.22
RFC1P35251 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.4■□□□□ 0.22
RFC1P35251 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC1P35251 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.4■□□□□ 0.22
RFC1P35251 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC1P35251 AC114501.2-201ENST00000439631 535 ntBASIC16.4■□□□□ 0.22
RFC1P35251 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.4■□□□□ 0.22
RFC1P35251 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.4■□□□□ 0.22
RFC1P35251 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RFC1P35251 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC1P35251 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.4■□□□□ 0.22
RFC1P35251 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.4■□□□□ 0.22
RFC1P35251 AC015910.1-201ENST00000579400 975 ntBASIC16.4■□□□□ 0.22
RFC1P35251 AC005498.2-205ENST00000593218 784 ntBASIC16.4■□□□□ 0.22
RFC1P35251 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RFC1P35251 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC1P35251 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC1P35251 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RFC1P35251 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
RFC1P35251 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.4■□□□□ 0.22
RFC1P35251 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFC1P35251 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
RFC1P35251 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC1P35251 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFC1P35251 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.39■□□□□ 0.21
RFC1P35251 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RFC1P35251 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC1P35251 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC1P35251 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC1P35251 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.39■□□□□ 0.21
RFC1P35251 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.39■□□□□ 0.21
RFC1P35251 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RFC1P35251 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.39■□□□□ 0.21
RFC1P35251 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
RFC1P35251 AC008738.7-201ENST00000609744 511 ntBASIC16.39■□□□□ 0.21
RFC1P35251 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.39■□□□□ 0.21
RFC1P35251 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.39■□□□□ 0.21
RFC1P35251 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFC1P35251 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RFC1P35251 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RFC1P35251 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RFC1P35251 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms