Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.93□□□□□ -0.02
PTX3P26022 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTX3P26022 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.93□□□□□ -0.02
PTX3P26022 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.93□□□□□ -0.02
PTX3P26022 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PTX3P26022 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.93□□□□□ -0.02
PTX3P26022 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.93□□□□□ -0.02
PTX3P26022 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.93□□□□□ -0.02
PTX3P26022 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
PTX3P26022 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.93□□□□□ -0.02
PTX3P26022 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.93□□□□□ -0.02
PTX3P26022 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.93□□□□□ -0.02
PTX3P26022 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.93□□□□□ -0.02
PTX3P26022 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTX3P26022 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.93□□□□□ -0.02
PTX3P26022 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.93□□□□□ -0.02
PTX3P26022 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
PTX3P26022 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.93□□□□□ -0.02
PTX3P26022 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.93□□□□□ -0.02
PTX3P26022 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PTX3P26022 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.93□□□□□ -0.02
PTX3P26022 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PTX3P26022 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.93□□□□□ -0.02
PTX3P26022 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.93□□□□□ -0.02
PTX3P26022 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.93□□□□□ -0.02
PTX3P26022 LINC01101-201ENST00000622953 1884 ntBASIC14.93□□□□□ -0.02
PTX3P26022 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
PTX3P26022 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PTX3P26022 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PTX3P26022 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.92□□□□□ -0.02
PTX3P26022 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.92□□□□□ -0.02
PTX3P26022 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.92□□□□□ -0.02
PTX3P26022 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.92□□□□□ -0.02
PTX3P26022 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PTX3P26022 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
PTX3P26022 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.92□□□□□ -0.02
PTX3P26022 TSSK5P-201ENST00000423978 907 ntBASIC14.92□□□□□ -0.02
PTX3P26022 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.92□□□□□ -0.02
PTX3P26022 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.92□□□□□ -0.02
PTX3P26022 AC009477.1-201ENST00000452936 217 ntBASIC14.92□□□□□ -0.02
PTX3P26022 KRT18P43-201ENST00000469825 1281 ntBASIC14.92□□□□□ -0.02
PTX3P26022 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.92□□□□□ -0.02
PTX3P26022 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.92□□□□□ -0.02
PTX3P26022 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PTX3P26022 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.92□□□□□ -0.02
PTX3P26022 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PTX3P26022 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PTX3P26022 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTX3P26022 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.91□□□□□ -0.02
PTX3P26022 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTX3P26022 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.91□□□□□ -0.02
PTX3P26022 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.91□□□□□ -0.02
PTX3P26022 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PTX3P26022 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
PTX3P26022 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
PTX3P26022 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.91□□□□□ -0.02
PTX3P26022 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms