Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCND1P24385 AC090616.6-203ENST00000579186 1945 ntBASIC15.73■□□□□ 0.11
CCND1P24385 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.73■□□□□ 0.11
CCND1P24385 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.73■□□□□ 0.11
CCND1P24385 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.73■□□□□ 0.11
CCND1P24385 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 AP006288.1-201ENST00000446065 395 ntBASIC15.73■□□□□ 0.11
CCND1P24385 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.73■□□□□ 0.11
CCND1P24385 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.73■□□□□ 0.11
CCND1P24385 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.73■□□□□ 0.11
CCND1P24385 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.73■□□□□ 0.11
CCND1P24385 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.73■□□□□ 0.11
CCND1P24385 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.73■□□□□ 0.11
CCND1P24385 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.73■□□□□ 0.11
CCND1P24385 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.73■□□□□ 0.11
CCND1P24385 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.73■□□□□ 0.11
CCND1P24385 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CCND1P24385 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCND1P24385 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.73■□□□□ 0.11
CCND1P24385 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CCND1P24385 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.72■□□□□ 0.11
CCND1P24385 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.72■□□□□ 0.11
CCND1P24385 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 AC008677.1-201ENST00000519230 1561 ntBASIC15.72■□□□□ 0.11
CCND1P24385 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.72■□□□□ 0.11
CCND1P24385 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CCND1P24385 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.72■□□□□ 0.11
CCND1P24385 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.72■□□□□ 0.11
CCND1P24385 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 HAUS4P1-201ENST00000406739 1145 ntBASIC15.72■□□□□ 0.11
CCND1P24385 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 AC004461.1-201ENST00000412461 403 ntBASIC15.72■□□□□ 0.11
CCND1P24385 KRT18P32-201ENST00000424695 1287 ntBASIC15.72■□□□□ 0.11
CCND1P24385 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.72■□□□□ 0.11
CCND1P24385 RNA5SP410-201ENST00000516285 106 ntBASIC15.72■□□□□ 0.11
CCND1P24385 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.72■□□□□ 0.11
CCND1P24385 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.72■□□□□ 0.11
CCND1P24385 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.72■□□□□ 0.11
CCND1P24385 AC061975.2-201ENST00000581722 295 ntBASIC15.72■□□□□ 0.11
CCND1P24385 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.72■□□□□ 0.11
CCND1P24385 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.72■□□□□ 0.11
CCND1P24385 AC079781.4-201ENST00000641908 219 ntBASIC15.72■□□□□ 0.11
CCND1P24385 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.72■□□□□ 0.11
CCND1P24385 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.72■□□□□ 0.11
CCND1P24385 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.72■□□□□ 0.11
CCND1P24385 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CCND1P24385 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CCND1P24385 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.72■□□□□ 0.11
CCND1P24385 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCND1P24385 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.71■□□□□ 0.11
CCND1P24385 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.71■□□□□ 0.11
CCND1P24385 AL122018.1-201ENST00000446607 2310 ntBASIC15.71■□□□□ 0.11
CCND1P24385 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.71■□□□□ 0.11
CCND1P24385 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCND1P24385 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCND1P24385 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCND1P24385 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms