Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
TOP1P11387 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.24■□□□□ 0.51
TOP1P11387 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
TOP1P11387 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.24■□□□□ 0.51
TOP1P11387 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TOP1P11387 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.24■□□□□ 0.51
TOP1P11387 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.24■□□□□ 0.51
TOP1P11387 KRT8P22-201ENST00000562317 1415 ntBASIC18.23■□□□□ 0.51
TOP1P11387 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC18.23■□□□□ 0.51
TOP1P11387 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.23■□□□□ 0.51
TOP1P11387 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
TOP1P11387 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC18.23■□□□□ 0.51
TOP1P11387 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.23■□□□□ 0.51
TOP1P11387 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.23■□□□□ 0.51
TOP1P11387 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.23■□□□□ 0.51
TOP1P11387 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.23■□□□□ 0.51
TOP1P11387 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TOP1P11387 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
TOP1P11387 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.23■□□□□ 0.51
TOP1P11387 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 DRD5P1-201ENST00000456605 1438 ntBASIC18.23■□□□□ 0.51
TOP1P11387 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.23■□□□□ 0.51
TOP1P11387 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.23■□□□□ 0.51
TOP1P11387 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TOP1P11387 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TOP1P11387 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18.22■□□□□ 0.51
TOP1P11387 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.22■□□□□ 0.51
TOP1P11387 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TOP1P11387 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TOP1P11387 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TOP1P11387 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 C1QBPP1-201ENST00000400117 770 ntBASIC18.22■□□□□ 0.51
TOP1P11387 AL162726.2-201ENST00000438986 1017 ntBASIC18.22■□□□□ 0.51
TOP1P11387 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.22■□□□□ 0.51
TOP1P11387 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.22■□□□□ 0.51
TOP1P11387 AC026410.3-201ENST00000514280 936 ntBASIC18.22■□□□□ 0.51
TOP1P11387 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.22■□□□□ 0.51
TOP1P11387 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TOP1P11387 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.22■□□□□ 0.51
TOP1P11387 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.22■□□□□ 0.51
TOP1P11387 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TOP1P11387 CU634019.7-201ENST00000624153 1185 ntBASIC18.22■□□□□ 0.51
TOP1P11387 FP236241.2-201ENST00000624906 1185 ntBASIC18.22■□□□□ 0.51
TOP1P11387 ABBA01031660.1-201ENST00000635219 756 ntBASIC18.22■□□□□ 0.51
TOP1P11387 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.22■□□□□ 0.51
TOP1P11387 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TOP1P11387 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TOP1P11387 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.22■□□□□ 0.51
TOP1P11387 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC18.22■□□□□ 0.51
TOP1P11387 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TOP1P11387 FLJ16779-201ENST00000612722 7638 ntBASIC18.21■□□□□ 0.51
TOP1P11387 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
TOP1P11387 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TOP1P11387 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TOP1P11387 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.21■□□□□ 0.51
TOP1P11387 AC092127.1-201ENST00000567093 3455 ntBASIC18.21■□□□□ 0.51
TOP1P11387 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC18.21■□□□□ 0.51
TOP1P11387 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.21■□□□□ 0.51
TOP1P11387 AC022532.1-201ENST00000624563 1728 ntBASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms