Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 ZNF259P1-201ENST00000407656 1365 ntBASIC14.13□□□□□ -0.15
HMGN1P05114 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.13□□□□□ -0.15
HMGN1P05114 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
HMGN1P05114 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.13□□□□□ -0.15
HMGN1P05114 AL591424.1-201ENST00000442569 1213 ntBASIC14.13□□□□□ -0.15
HMGN1P05114 SPDYE11-202ENST00000450699 704 ntBASIC14.13□□□□□ -0.15
HMGN1P05114 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 SPDYE9P-201ENST00000570642 692 ntBASIC14.13□□□□□ -0.15
HMGN1P05114 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.13□□□□□ -0.15
HMGN1P05114 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.13□□□□□ -0.15
HMGN1P05114 SPDYE10P-202ENST00000612005 668 ntBASIC14.13□□□□□ -0.15
HMGN1P05114 SPDYE8P-202ENST00000612377 668 ntBASIC14.13□□□□□ -0.15
HMGN1P05114 AC091812.2-201ENST00000619081 385 ntBASIC14.13□□□□□ -0.15
HMGN1P05114 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.13□□□□□ -0.15
HMGN1P05114 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 AC138969.2-201ENST00000532739 9932 ntBASIC14.13□□□□□ -0.15
HMGN1P05114 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HMGN1P05114 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
HMGN1P05114 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HMGN1P05114 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HMGN1P05114 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
HMGN1P05114 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
HMGN1P05114 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HMGN1P05114 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGN1P05114 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGN1P05114 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
HMGN1P05114 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGN1P05114 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HMGN1P05114 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HMGN1P05114 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGN1P05114 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGN1P05114 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGN1P05114 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGN1P05114 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HMGN1P05114 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
HMGN1P05114 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
HMGN1P05114 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.12□□□□□ -0.15
HMGN1P05114 AC243562.1-201ENST00000560672 389 ntBASIC14.12□□□□□ -0.15
HMGN1P05114 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGN1P05114 AC026120.1-201ENST00000611536 926 ntBASIC14.12□□□□□ -0.15
HMGN1P05114 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGN1P05114 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
HMGN1P05114 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
HMGN1P05114 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGN1P05114 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HMGN1P05114 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 CR383656.2-201ENST00000548656 2254 ntBASIC14.12□□□□□ -0.15
HMGN1P05114 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGN1P05114 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
HMGN1P05114 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HMGN1P05114 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGN1P05114 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGN1P05114 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.12□□□□□ -0.15
HMGN1P05114 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGN1P05114 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGN1P05114 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGN1P05114 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGN1P05114 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HMGN1P05114 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGN1P05114 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.11□□□□□ -0.15
HMGN1P05114 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGN1P05114 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGN1P05114 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HMGN1P05114 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms