Protein–RNA interactions for Protein: P01615

IGKV2D-28, Immunoglobulin kappa variable 2D-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28P01615 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.33□□□□□ -0.76
IGKV2D-28P01615 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 HMGA1P7-201ENST00000406908 502 ntBASIC10.32□□□□□ -0.76
IGKV2D-28P01615 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 FAM185BP-201ENST00000443595 716 ntBASIC10.32□□□□□ -0.76
IGKV2D-28P01615 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 AC018712.1-201ENST00000455767 687 ntBASIC10.32□□□□□ -0.76
IGKV2D-28P01615 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 CIPC-205ENST00000555437 566 ntTSL 3 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 AL031432.2-201ENST00000566714 459 ntBASIC10.32□□□□□ -0.76
IGKV2D-28P01615 AL928711.1-201ENST00000570165 459 ntBASIC10.32□□□□□ -0.76
IGKV2D-28P01615 OR7E47P-204ENST00000575924 449 ntBASIC10.32□□□□□ -0.76
IGKV2D-28P01615 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 AC097359.2-201ENST00000604992 2389 ntBASIC10.32□□□□□ -0.76
IGKV2D-28P01615 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 REXO1L1P-202ENST00000608646 1974 ntBASIC10.32□□□□□ -0.76
IGKV2D-28P01615 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
IGKV2D-28P01615 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
IGKV2D-28P01615 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC10.31□□□□□ -0.76
IGKV2D-28P01615 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC10.31□□□□□ -0.76
IGKV2D-28P01615 AC107918.4-201ENST00000641966 3141 ntBASIC10.31□□□□□ -0.76
IGKV2D-28P01615 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
IGKV2D-28P01615 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
IGKV2D-28P01615 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms