Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC6.73□□□□□ -1.33
USH2AO75445 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 AC008764.6-201ENST00000595909 2069 ntBASIC6.73□□□□□ -1.33
USH2AO75445 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
USH2AO75445 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC6.73□□□□□ -1.33
USH2AO75445 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC6.73□□□□□ -1.33
USH2AO75445 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC6.73□□□□□ -1.33
USH2AO75445 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC6.73□□□□□ -1.33
USH2AO75445 AP000358.1-201ENST00000456260 156 ntBASIC6.73□□□□□ -1.33
USH2AO75445 CHCHD2P9-201ENST00000461726 456 ntBASIC6.73□□□□□ -1.33
USH2AO75445 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC6.73□□□□□ -1.33
USH2AO75445 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
USH2AO75445 AC141586.5-201ENST00000624546 2050 ntBASIC6.73□□□□□ -1.33
USH2AO75445 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 AC025183.3-201ENST00000623526 1482 ntBASIC6.73□□□□□ -1.33
USH2AO75445 REXO1L5P-201ENST00000622260 2098 ntBASIC6.73□□□□□ -1.33
USH2AO75445 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 OR10N1P-201ENST00000392758 869 ntBASIC6.73□□□□□ -1.33
USH2AO75445 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
USH2AO75445 RHOQP2-201ENST00000449922 579 ntBASIC6.73□□□□□ -1.33
USH2AO75445 SCARNA12-201ENST00000459155 270 ntBASIC6.73□□□□□ -1.33
USH2AO75445 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC6.73□□□□□ -1.33
USH2AO75445 CD164-210ENST00000512821 964 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 AL450487.2-201ENST00000615934 407 ntBASIC6.73□□□□□ -1.33
USH2AO75445 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 KRT8P31-201ENST00000504812 1408 ntBASIC6.73□□□□□ -1.33
USH2AO75445 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC6.73□□□□□ -1.33
USH2AO75445 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
USH2AO75445 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
USH2AO75445 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 AC108734.2-201ENST00000420887 1069 ntBASIC6.73□□□□□ -1.33
USH2AO75445 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 AL645933.1-201ENST00000440087 609 ntBASIC6.73□□□□□ -1.33
USH2AO75445 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC6.73□□□□□ -1.33
USH2AO75445 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC6.73□□□□□ -1.33
USH2AO75445 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC6.73□□□□□ -1.33
USH2AO75445 AC006116.2-201ENST00000589958 988 ntBASIC6.73□□□□□ -1.33
USH2AO75445 MIR6769A-201ENST00000617340 73 ntBASIC6.73□□□□□ -1.33
USH2AO75445 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC6.73□□□□□ -1.33
USH2AO75445 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
USH2AO75445 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC6.73□□□□□ -1.33
USH2AO75445 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 AC020910.5-201ENST00000623668 1865 ntBASIC6.73□□□□□ -1.33
USH2AO75445 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 RBM38-204ENST00000371219 760 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 AL121949.3-201ENST00000406684 385 ntBASIC6.73□□□□□ -1.33
USH2AO75445 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC6.73□□□□□ -1.33
USH2AO75445 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
USH2AO75445 AC006122.1-201ENST00000493323 440 ntBASIC6.73□□□□□ -1.33
USH2AO75445 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC6.73□□□□□ -1.33
USH2AO75445 CCNC-217ENST00000523985 958 ntTSL 2 BASIC6.73□□□□□ -1.33
USH2AO75445 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
USH2AO75445 AC005332.8-201ENST00000622750 2735 ntBASIC6.72□□□□□ -1.33
USH2AO75445 AL109809.1-201ENST00000418979 1367 ntBASIC6.72□□□□□ -1.33
USH2AO75445 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms